diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md
index 6097bb64..3a4486ae 100644
--- a/CONTRIBUTING.md
+++ b/CONTRIBUTING.md
@@ -256,7 +256,7 @@ hand, so the checksums come from the same helper `ensure_binary` verifies with:
 ```bash
 python scripts/make_registry_snippet.py binary --bundle blast --version 2.17.0 \
     --provides blastp makeblastdb --dir zips \
-    --base-url https://github.com/SysBioChalmers/raven-data/releases/download/blast-2.17.0
+    --base-url https://github.com/CompMetEng/toolbox-assets/releases/download/blast-2.17.0
 ```
 
 Adding a new tool needs no new provisioning code: a bundle entry with the right
diff --git a/data/manifest.example.json b/data/manifest.example.json
index 1c3bb871..2a075d19 100644
--- a/data/manifest.example.json
+++ b/data/manifest.example.json
@@ -6,25 +6,25 @@
       "version": "kegg118",
       "description": "KEGG reference model + KO/reaction tables (core bundle), taxonomy, and prokaryote/eukaryote HMM libraries for getKEGGModelForOrganism.",
       "license": "Derived from the KEGG database; redistributed with permission from KEGG.",
-      "source": "https://github.com/SysBioChalmers/raven-data/releases/tag/kegg118",
+      "source": "https://github.com/CompMetEng/toolbox-assets/releases/tag/kegg118",
       "files": {
         "kegg118_core.tar.gz": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/kegg118/kegg118_core.tar.gz",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/kegg118/kegg118_core.tar.gz",
           "sha256": "0000000000000000000000000000000000000000000000000000000000000000",
           "bytes": 0
         },
         "kegg118_eukaryotes.hmm.gz": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/kegg118/kegg118_eukaryotes.hmm.gz",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/kegg118/kegg118_eukaryotes.hmm.gz",
           "sha256": "0000000000000000000000000000000000000000000000000000000000000000",
           "bytes": 0
         },
         "kegg118_prokaryotes.hmm.gz": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/kegg118/kegg118_prokaryotes.hmm.gz",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/kegg118/kegg118_prokaryotes.hmm.gz",
           "sha256": "0000000000000000000000000000000000000000000000000000000000000000",
           "bytes": 0
         },
         "kegg118_taxonomy.gz": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/kegg118/kegg118_taxonomy.gz",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/kegg118/kegg118_taxonomy.gz",
           "sha256": "0000000000000000000000000000000000000000000000000000000000000000",
           "bytes": 0
         }
@@ -40,17 +40,17 @@
       ],
       "platforms": {
         "linux-x86_64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/blast-2.17.0/blast-2.17.0-linux-x86_64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/blast-2.17.0/blast-2.17.0-linux-x86_64.zip",
           "sha256": "0000000000000000000000000000000000000000000000000000000000000000",
           "bytes": 0
         },
         "macos-arm64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/blast-2.17.0/blast-2.17.0-macos-arm64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/blast-2.17.0/blast-2.17.0-macos-arm64.zip",
           "sha256": "0000000000000000000000000000000000000000000000000000000000000000",
           "bytes": 0
         },
         "windows-x86_64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/blast-2.17.0/blast-2.17.0-windows-x86_64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/blast-2.17.0/blast-2.17.0-windows-x86_64.zip",
           "sha256": "0000000000000000000000000000000000000000000000000000000000000000",
           "bytes": 0
         }
@@ -65,17 +65,17 @@
       ],
       "platforms": {
         "linux-x86_64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/diamond-2.1.17/diamond-2.1.17-linux-x86_64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/diamond-2.1.17/diamond-2.1.17-linux-x86_64.zip",
           "sha256": "0000000000000000000000000000000000000000000000000000000000000000",
           "bytes": 0
         },
         "macos-arm64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/diamond-2.1.17/diamond-2.1.17-macos-arm64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/diamond-2.1.17/diamond-2.1.17-macos-arm64.zip",
           "sha256": "0000000000000000000000000000000000000000000000000000000000000000",
           "bytes": 0
         },
         "windows-x86_64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/diamond-2.1.17/diamond-2.1.17-windows-x86_64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/diamond-2.1.17/diamond-2.1.17-windows-x86_64.zip",
           "sha256": "0000000000000000000000000000000000000000000000000000000000000000",
           "bytes": 0
         }
@@ -90,17 +90,17 @@
       ],
       "platforms": {
         "windows-x86_64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/hmmer-3.3.2/hmmer-3.3.2-windows-x86_64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/hmmer-3.3.2/hmmer-3.3.2-windows-x86_64.zip",
           "sha256": "0000000000000000000000000000000000000000000000000000000000000000",
           "bytes": 0
         },
         "linux-x86_64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/hmmer-3.4.0/hmmer-3.4.0-linux-x86_64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/hmmer-3.4.0/hmmer-3.4.0-linux-x86_64.zip",
           "sha256": "0000000000000000000000000000000000000000000000000000000000000000",
           "bytes": 0
         },
         "macos-arm64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/hmmer-3.4.0/hmmer-3.4.0-macos-arm64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/hmmer-3.4.0/hmmer-3.4.0-macos-arm64.zip",
           "sha256": "0000000000000000000000000000000000000000000000000000000000000000",
           "bytes": 0
         }
diff --git a/data/manifest.json b/data/manifest.json
index 5c2739b9..b8759a35 100644
--- a/data/manifest.json
+++ b/data/manifest.json
@@ -6,25 +6,25 @@
       "version": "kegg118",
       "description": "KEGG reference model + KO/reaction tables (core bundle), taxonomy, and prokaryote/eukaryote HMM libraries for getKEGGModelForOrganism.",
       "license": "Derived from the KEGG database; redistributed with permission from KEGG.",
-      "source": "https://github.com/SysBioChalmers/raven-data/releases/tag/kegg118",
+      "source": "https://github.com/CompMetEng/toolbox-assets/releases/tag/kegg118",
       "files": {
         "kegg118_core.tar.gz": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/kegg118/kegg118_core.tar.gz",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/kegg118/kegg118_core.tar.gz",
           "sha256": "520ba8bb09d6ca479ca1ab84ea70bf7c1d7f82d8f6406b717cee293b7c8609ca",
           "bytes": 49049340
         },
         "kegg118_eukaryotes.hmm.gz": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/kegg118/kegg118_eukaryotes.hmm.gz",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/kegg118/kegg118_eukaryotes.hmm.gz",
           "sha256": "05999a38f3a1a5186d19d4e415f5029c33af56a08edb75190bd98ea19437765a",
           "bytes": 135087358
         },
         "kegg118_prokaryotes.hmm.gz": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/kegg118/kegg118_prokaryotes.hmm.gz",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/kegg118/kegg118_prokaryotes.hmm.gz",
           "sha256": "ff9f25389e4c9c1cd58c13ee8d48d68a23152d04761d2e5875a9b5de8051b7b4",
           "bytes": 154511741
         },
         "kegg118_taxonomy.gz": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/kegg118/kegg118_taxonomy.gz",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/kegg118/kegg118_taxonomy.gz",
           "sha256": "5499c9537ac2697592dd1b484f309027509472e25a9d39d925dc581b9eef46e2",
           "bytes": 228754
         }
@@ -36,22 +36,22 @@
       "source": "Pfam/InterPro HMMs + TCDB sequences",
       "files": {
         "tcdb.dmnd": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/transporters-2026-07-01/tcdb.dmnd",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/transporters-2026-07-01/tcdb.dmnd",
           "sha256": "ae8db23287ef415cad8a3004134b0d94024230f82afb5eb00a45941f8b8c04e6",
           "bytes": 13813605
         },
         "transporter_pfam.hmm": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/transporters-2026-07-01/transporter_pfam.hmm",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/transporters-2026-07-01/transporter_pfam.hmm",
           "sha256": "0c44e7bfc1390a08c914915a87b9b85398528be5db4294f91c33387c46c48f19",
           "bytes": 3524685
         },
         "tcdb_substrates.tsv": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/transporters-2026-07-01/tcdb_substrates.tsv",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/transporters-2026-07-01/tcdb_substrates.tsv",
           "sha256": "f85f7b866b325d1e221089ccb5fd7a0491d1c26f8282c9ebb7c2d11bf3f1e79c",
           "bytes": 219635
         },
         "chebi_relations.tsv.gz": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/transporters-2026-07-01/chebi_relations.tsv.gz",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/transporters-2026-07-01/chebi_relations.tsv.gz",
           "sha256": "b6910bf9c7a405e4f1fc112030123dd79c982112b8f460cebefd9235c621d192",
           "bytes": 1231364
         }
@@ -67,17 +67,17 @@
       ],
       "platforms": {
         "linux-x86_64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/blast-2.17.0/blast-2.17.0-linux-x86_64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/blast-2.17.0/blast-2.17.0-linux-x86_64.zip",
           "sha256": "c887deae9f3ac85bb5a0bbbf9af254d00f3bebf9764304a9582db39e1c843085",
           "bytes": 25262842
         },
         "macos-arm64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/blast-2.17.0/blast-2.17.0-macos-arm64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/blast-2.17.0/blast-2.17.0-macos-arm64.zip",
           "sha256": "f1ff0b9e718fbb252d240e31e4f85f842f6ef8e99a0e97bf5f66390295c795da",
           "bytes": 35244129
         },
         "windows-x86_64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/blast-2.17.0/blast-2.17.0-windows-x86_64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/blast-2.17.0/blast-2.17.0-windows-x86_64.zip",
           "sha256": "b80d6ee1c1f85b8c18ae009e7d2ee844738d1a17338928570f5113ecd16e8326",
           "bytes": 13016674
         }
@@ -92,17 +92,17 @@
       ],
       "platforms": {
         "linux-x86_64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/diamond-2.1.17/diamond-2.1.17-linux-x86_64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/diamond-2.1.17/diamond-2.1.17-linux-x86_64.zip",
           "sha256": "6e432f8b205fb14c355c330cd4d802acb7decaaf17cfbe90573c614b6dc976c8",
           "bytes": 8968841
         },
         "macos-arm64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/diamond-2.1.17/diamond-2.1.17-macos-arm64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/diamond-2.1.17/diamond-2.1.17-macos-arm64.zip",
           "sha256": "3f929c151b8d8061391d73510b2011e9c8820fa5e2b6b9ae142c3b4dfccced5d",
           "bytes": 6476740
         },
         "windows-x86_64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/diamond-2.1.17/diamond-2.1.17-windows-x86_64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/diamond-2.1.17/diamond-2.1.17-windows-x86_64.zip",
           "sha256": "daabab3d6072f4a37e701a5e02944f0fbcf8791ae5daa125fb7b5daed4a9be6d",
           "bytes": 3341980
         }
@@ -117,17 +117,17 @@
       ],
       "platforms": {
         "windows-x86_64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/hmmer-3.3.2/hmmer-3.3.2-windows-x86_64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/hmmer-3.3.2/hmmer-3.3.2-windows-x86_64.zip",
           "sha256": "19ce00c5dcdead0cdcb1f89cfafac299521afa79296e9a671baf73a64b7385eb",
           "bytes": 1802736
         },
         "linux-x86_64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/hmmer-3.4.0/hmmer-3.4.0-linux-x86_64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/hmmer-3.4.0/hmmer-3.4.0-linux-x86_64.zip",
           "sha256": "d60e6b4bead44cf6d0cbd5711f9bda4a11cf72d7db07545ee0a43160b60b9fac",
           "bytes": 215961
         },
         "macos-arm64": {
-          "url": "https://github.com/SysBioChalmers/raven-data/releases/download/hmmer-3.4.0/hmmer-3.4.0-macos-arm64.zip",
+          "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/hmmer-3.4.0/hmmer-3.4.0-macos-arm64.zip",
           "sha256": "89596237e4a6a325a5f8526983696a1197e6970b1352db81a9817a165cd62f82",
           "bytes": 339284
         }
diff --git a/scripts/README.md b/scripts/README.md
index 6cb8fc58..78b24a65 100644
--- a/scripts/README.md
+++ b/scripts/README.md
@@ -27,15 +27,15 @@ provenance. See [maintaining_binaries.md](https://github.com/SysBioChalmers/rave
 python scripts/build_binary_bundles.py        # -> dist/binaries/*.zip (+ checksums, PROVENANCE)
 ```
 
-## `publish_to_raven_data.py`
+## `publish_to_toolbox_assets.py`
 
-Upload release assets to the [`raven-data`](https://github.com/SysBioChalmers/raven-data)
+Upload release assets to the [`toolbox-assets`](https://github.com/CompMetEng/toolbox-assets)
 repo with `gh`, idempotently (immutable per-version tags; skips assets already present).
 
 ```bash
-python scripts/publish_to_raven_data.py binaries --dir dist/binaries
-python scripts/publish_to_raven_data.py release --tag kegg118 --dir artefacts
-python scripts/publish_to_raven_data.py --dry-run release --tag manifest-v1 data/manifest.json
+python scripts/publish_to_toolbox_assets.py binaries --dir dist/binaries
+python scripts/publish_to_toolbox_assets.py release --tag kegg118 --dir artefacts
+python scripts/publish_to_toolbox_assets.py --dry-run release --tag manifest-v1 data/manifest.json
 ```
 
 ## `build_kegg_artefacts.py`
diff --git a/scripts/build_binary_bundles.py b/scripts/build_binary_bundles.py
index 6eaabffb..b8733817 100644
--- a/scripts/build_binary_bundles.py
+++ b/scripts/build_binary_bundles.py
@@ -155,7 +155,7 @@ def main(argv: list[str] | None = None) -> None:
     p.add_argument("--out", type=Path, default=Path("dist/binaries"), help="output folder")
     p.add_argument(
         "--base-url",
-        default="https://github.com/SysBioChalmers/raven-toolbox/releases/download",
+        default="https://github.com/CompMetEng/toolbox-assets/releases/download",
         help="release-download base; the snippet URLs become <base>/<bundle>-<version>/<asset>",
     )
     args = p.parse_args(argv)
diff --git a/scripts/build_transporter_data.py b/scripts/build_transporter_data.py
index 47777cf2..dd172dd2 100644
--- a/scripts/build_transporter_data.py
+++ b/scripts/build_transporter_data.py
@@ -1,8 +1,8 @@
 #!/usr/bin/env python3
 """Build the transporter reference databases for evidence-aware transport scoring.
 
-Produces four raven-data artefacts (host them under a ``transporters-<date>`` release, then run
-``make_registry_snippet.py`` + ``publish_to_raven_data.py`` per
+Produces four toolbox-assets artefacts (host them under a ``transporters-<date>`` release, then run
+``make_registry_snippet.py`` + ``publish_to_toolbox_assets.py`` per
 https://github.com/SysBioChalmers/raven-gecko-parity/blob/main/docs/artefact_hosting.md):
 
 * ``transporter_pfam.hmm`` — the HMMER database of the transporter Pfam families in
diff --git a/scripts/make_registry_snippet.py b/scripts/make_registry_snippet.py
index df5c341a..da2d22e7 100644
--- a/scripts/make_registry_snippet.py
+++ b/scripts/make_registry_snippet.py
@@ -8,7 +8,7 @@
 Examples
 --------
 Pass ``--tag`` (the GitHub release tag the assets were uploaded to); the script builds the
-``https://github.com/SysBioChalmers/raven-toolbox/releases/download/<tag>`` asset prefix
+``https://github.com/CompMetEng/toolbox-assets/releases/download/<tag>`` asset prefix
 itself, so you never hand it a full URL (and can't fumble the ``releases/download`` path).
 
 Data artefacts (KEGG reference model + tables + HMM libraries) for one release::
@@ -46,7 +46,7 @@
 from raven_toolbox.binaries import _sha256
 
 #: Default GitHub repository whose release assets the registry/manifest point at.
-DEFAULT_REPO = "SysBioChalmers/raven-toolbox"
+DEFAULT_REPO = "CompMetEng/toolbox-assets"
 
 
 def release_base_url(tag: str, repo: str = DEFAULT_REPO) -> str:
diff --git a/scripts/publish_to_raven_data.py b/scripts/publish_to_toolbox_assets.py
similarity index 93%
rename from scripts/publish_to_raven_data.py
rename to scripts/publish_to_toolbox_assets.py
index a8262e50..0085d798 100644
--- a/scripts/publish_to_raven_data.py
+++ b/scripts/publish_to_toolbox_assets.py
@@ -1,5 +1,5 @@
 #!/usr/bin/env python
-"""Publish release assets to the raven-data repo with the GitHub CLI (``gh``).
+"""Publish release assets to the toolbox-assets repo with the GitHub CLI (``gh``).
 
 Maintainer-side. Creates per-artefact, **immutable** release tags and uploads the
 assets to them — idempotently: an existing tag is reused and only *missing* assets
@@ -10,11 +10,11 @@
 Subcommands::
 
     # one release tag from explicit files or a whole directory
-    publish_to_raven_data.py release --tag kegg118 --dir C:/Work/GitHub/kegg118
-    publish_to_raven_data.py release --tag manifest-v1 data/manifest.json
+    publish_to_toolbox_assets.py release --tag kegg118 --dir C:/Work/GitHub/kegg118
+    publish_to_toolbox_assets.py release --tag manifest-v1 data/manifest.json
 
     # every binary ZIP in a dir, auto-grouped into <bundle>-<version> tags
-    publish_to_raven_data.py binaries --dir dist/binaries
+    publish_to_toolbox_assets.py binaries --dir dist/binaries
 
 Add ``--dry-run`` to print the ``gh`` calls without executing them.
 """
@@ -26,7 +26,7 @@
 import subprocess
 from pathlib import Path
 
-DEFAULT_REPO = "SysBioChalmers/raven-data"
+DEFAULT_REPO = "CompMetEng/toolbox-assets"
 # Metadata sidecars produced by the build scripts — never uploaded as assets.
 _SKIP = {"checksums.txt", "PROVENANCE.txt", "manifest_binaries.json"}
 _BUNDLE_RE = re.compile(r"^([a-z0-9]+)-(\d+\.\d+(?:\.\d+)?)-")  # blast-2.17.0-linux-x86_64.zip
diff --git a/src/raven_toolbox/binaries.py b/src/raven_toolbox/binaries.py
index 24a0c8b6..a1e3d2ad 100644
--- a/src/raven_toolbox/binaries.py
+++ b/src/raven_toolbox/binaries.py
@@ -22,7 +22,7 @@
 from pathlib import Path
 from urllib.request import urlopen
 
-# Registry of bundled binaries, hosted as release assets in the raven-data repo.
+# Registry of bundled binaries, hosted as release assets in the toolbox-assets repo.
 # Keyed by *bundle*; one bundle can provide several executables (e.g. "blast" ->
 # blastp + makeblastdb). Baked snapshot of data/manifest.json's `binaries` block —
 # regenerate from the manifest with `python scripts/make_registry_snippet.py sync`
@@ -34,15 +34,15 @@
         "provides": ["blastp", "makeblastdb"],
         "platforms": {
             "linux-x86_64": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/blast-2.17.0/blast-2.17.0-linux-x86_64.zip",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/blast-2.17.0/blast-2.17.0-linux-x86_64.zip",
                 "sha256": "c887deae9f3ac85bb5a0bbbf9af254d00f3bebf9764304a9582db39e1c843085",
             },
             "macos-arm64": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/blast-2.17.0/blast-2.17.0-macos-arm64.zip",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/blast-2.17.0/blast-2.17.0-macos-arm64.zip",
                 "sha256": "f1ff0b9e718fbb252d240e31e4f85f842f6ef8e99a0e97bf5f66390295c795da",
             },
             "windows-x86_64": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/blast-2.17.0/blast-2.17.0-windows-x86_64.zip",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/blast-2.17.0/blast-2.17.0-windows-x86_64.zip",
                 "sha256": "b80d6ee1c1f85b8c18ae009e7d2ee844738d1a17338928570f5113ecd16e8326",
             },
         },
@@ -52,15 +52,15 @@
         "provides": ["diamond"],
         "platforms": {
             "linux-x86_64": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/diamond-2.1.17/diamond-2.1.17-linux-x86_64.zip",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/diamond-2.1.17/diamond-2.1.17-linux-x86_64.zip",
                 "sha256": "6e432f8b205fb14c355c330cd4d802acb7decaaf17cfbe90573c614b6dc976c8",
             },
             "macos-arm64": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/diamond-2.1.17/diamond-2.1.17-macos-arm64.zip",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/diamond-2.1.17/diamond-2.1.17-macos-arm64.zip",
                 "sha256": "3f929c151b8d8061391d73510b2011e9c8820fa5e2b6b9ae142c3b4dfccced5d",
             },
             "windows-x86_64": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/diamond-2.1.17/diamond-2.1.17-windows-x86_64.zip",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/diamond-2.1.17/diamond-2.1.17-windows-x86_64.zip",
                 "sha256": "daabab3d6072f4a37e701a5e02944f0fbcf8791ae5daa125fb7b5daed4a9be6d",
             },
         },
@@ -70,15 +70,15 @@
         "provides": ["hmmsearch"],
         "platforms": {
             "windows-x86_64": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/hmmer-3.3.2/hmmer-3.3.2-windows-x86_64.zip",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/hmmer-3.3.2/hmmer-3.3.2-windows-x86_64.zip",
                 "sha256": "19ce00c5dcdead0cdcb1f89cfafac299521afa79296e9a671baf73a64b7385eb",
             },
             "linux-x86_64": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/hmmer-3.4.0/hmmer-3.4.0-linux-x86_64.zip",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/hmmer-3.4.0/hmmer-3.4.0-linux-x86_64.zip",
                 "sha256": "d60e6b4bead44cf6d0cbd5711f9bda4a11cf72d7db07545ee0a43160b60b9fac",
             },
             "macos-arm64": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/hmmer-3.4.0/hmmer-3.4.0-macos-arm64.zip",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/hmmer-3.4.0/hmmer-3.4.0-macos-arm64.zip",
                 "sha256": "89596237e4a6a325a5f8526983696a1197e6970b1352db81a9817a165cd62f82",
             },
         },
diff --git a/src/raven_toolbox/data.py b/src/raven_toolbox/data.py
index 6b4ea5cd..5c3a4fbd 100644
--- a/src/raven_toolbox/data.py
+++ b/src/raven_toolbox/data.py
@@ -30,26 +30,26 @@
 
 # dataset -> {"version": str, "files": {filename: {"url": str, "sha256": str}}}
 # Baked snapshot of data/manifest.json (the cross-language source of truth). Assets
-# are hosted in the raven-data repo's releases. Regenerate this block from the
+# are hosted in the toolbox-assets repo's releases. Regenerate this block from the
 # manifest with `python scripts/make_registry_snippet.py sync` (never hand-edit).
 _DATA_REGISTRY: dict = {
     "kegg": {
         "version": "kegg118",
         "files": {
             "kegg118_core.tar.gz": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/kegg118/kegg118_core.tar.gz",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/kegg118/kegg118_core.tar.gz",
                 "sha256": "520ba8bb09d6ca479ca1ab84ea70bf7c1d7f82d8f6406b717cee293b7c8609ca",
             },
             "kegg118_eukaryotes.hmm.gz": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/kegg118/kegg118_eukaryotes.hmm.gz",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/kegg118/kegg118_eukaryotes.hmm.gz",
                 "sha256": "05999a38f3a1a5186d19d4e415f5029c33af56a08edb75190bd98ea19437765a",
             },
             "kegg118_prokaryotes.hmm.gz": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/kegg118/kegg118_prokaryotes.hmm.gz",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/kegg118/kegg118_prokaryotes.hmm.gz",
                 "sha256": "ff9f25389e4c9c1cd58c13ee8d48d68a23152d04761d2e5875a9b5de8051b7b4",
             },
             "kegg118_taxonomy.gz": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/kegg118/kegg118_taxonomy.gz",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/kegg118/kegg118_taxonomy.gz",
                 "sha256": "5499c9537ac2697592dd1b484f309027509472e25a9d39d925dc581b9eef46e2",
             },
         },
@@ -58,19 +58,19 @@
         "version": "transporters-2026-07-01",
         "files": {
             "tcdb.dmnd": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/transporters-2026-07-01/tcdb.dmnd",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/transporters-2026-07-01/tcdb.dmnd",
                 "sha256": "ae8db23287ef415cad8a3004134b0d94024230f82afb5eb00a45941f8b8c04e6",
             },
             "transporter_pfam.hmm": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/transporters-2026-07-01/transporter_pfam.hmm",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/transporters-2026-07-01/transporter_pfam.hmm",
                 "sha256": "0c44e7bfc1390a08c914915a87b9b85398528be5db4294f91c33387c46c48f19",
             },
             "tcdb_substrates.tsv": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/transporters-2026-07-01/tcdb_substrates.tsv",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/transporters-2026-07-01/tcdb_substrates.tsv",
                 "sha256": "f85f7b866b325d1e221089ccb5fd7a0491d1c26f8282c9ebb7c2d11bf3f1e79c",
             },
             "chebi_relations.tsv.gz": {
-                "url": "https://github.com/SysBioChalmers/raven-data/releases/download/transporters-2026-07-01/chebi_relations.tsv.gz",
+                "url": "https://github.com/CompMetEng/toolbox-assets/releases/download/transporters-2026-07-01/chebi_relations.tsv.gz",
                 "sha256": "b6910bf9c7a405e4f1fc112030123dd79c982112b8f460cebefd9235c621d192",
             },
         },
diff --git a/src/raven_toolbox/localization/substrate_ontology.py b/src/raven_toolbox/localization/substrate_ontology.py
index 340b6c7a..5c49f029 100644
--- a/src/raven_toolbox/localization/substrate_ontology.py
+++ b/src/raven_toolbox/localization/substrate_ontology.py
@@ -1,6 +1,6 @@
 """ChEBI-ontology substrate matching — the substrate-specific layer of evidence-aware transport scoring.
 
-Two curated raven-data artefacts underlie this (built by ``scripts/build_transporter_data.py``):
+Two curated toolbox-assets artefacts underlie this (built by ``scripts/build_transporter_data.py``):
 
 * ``tcdb_substrates.tsv`` — TCDB's curated ``TC-ID -> substrate ChEBI(s)`` table;
 * ``chebi_relations.tsv.gz`` — the ChEBI ``is_a`` graph plus the protonation/tautomer bridges.
@@ -77,7 +77,7 @@ def load(
         substrates_path: str | Path | None = None,
     ) -> SubstrateOntology:
         """Build a :class:`SubstrateOntology` from the ChEBI relations graph and the TCDB substrate
-        table, auto-downloading/caching each (the packaged raven-data artefacts) when its path is
+        table, auto-downloading/caching each (the packaged toolbox-assets artefacts) when its path is
         left as ``None``."""
         relations_path = (relations_path if relations_path is not None
                           else ensure_data_file("transporters", "chebi_relations.tsv.gz"))
diff --git a/src/raven_toolbox/localization/transport_evidence.py b/src/raven_toolbox/localization/transport_evidence.py
index a844bcd3..cc0b154a 100644
--- a/src/raven_toolbox/localization/transport_evidence.py
+++ b/src/raven_toolbox/localization/transport_evidence.py
@@ -308,7 +308,7 @@ def annotate_proteome(
 
     Scans the proteome FASTA (headers = gene ids, as written by :func:`prepare_deeploc_input`) against
     the transporter Pfam HMM database (``hmmsearch --cut_ga``) and the TCDB DIAMOND database
-    (``diamond blastp``); both databases auto-download from raven-data if not supplied. Pfam families
+    (``diamond blastp``); both databases auto-download from toolbox-assets if not supplied. Pfam families
     and TCDB TC-families map to coarse substrate classes via
     :mod:`raven_toolbox.localization.transporter_tables`, and each gene's TCDB TC-IDs map to their
     curated **substrate ChEBIs** (``substrates``: a ``tcdb_substrates.tsv`` path, or ``False`` to skip
diff --git a/src/raven_toolbox/manifest.py b/src/raven_toolbox/manifest.py
index 7eb00869..3db9adbd 100644
--- a/src/raven_toolbox/manifest.py
+++ b/src/raven_toolbox/manifest.py
@@ -1,4 +1,4 @@
-"""Load a raven-data manifest into the runtime resolver registries.
+"""Load a toolbox-assets manifest into the runtime resolver registries.
 
 A *manifest* is the single, language-agnostic source of truth for every downloadable
 artefact (KEGG tables / HMMs, …) and external-binary bundle (BLAST / DIAMOND / HMMER).
@@ -15,7 +15,7 @@
 Usage::
 
     from raven_toolbox import manifest
-    manifest.load_into_registries("https://github.com/SysBioChalmers/raven-data/releases/download/manifest-v1/manifest.json")
+    manifest.load_into_registries("https://github.com/CompMetEng/toolbox-assets/releases/download/manifest-v1/manifest.json")
 
 or set ``RAVEN_PYTHON_MANIFEST`` (a path or URL) and the resolvers load it lazily on first
 use::
diff --git a/tests/test_binaries.py b/tests/test_binaries.py
index 39d88fda..fae05aee 100644
--- a/tests/test_binaries.py
+++ b/tests/test_binaries.py
@@ -35,7 +35,7 @@ def test_resolve_unresolvable_raises(monkeypatch):
         binaries.resolve_binary("mafft")
 
 
-def test_default_registry_urls_point_at_raven_data():
+def test_default_registry_urls_point_at_toolbox_assets():
     # Guard against a straggler/old host slipping into the baked registries.
     from raven_toolbox import data as data_mod
 
@@ -44,7 +44,7 @@ def test_default_registry_urls_point_at_raven_data():
         f["url"] for d in data_mod._DATA_REGISTRY.values() for f in d["files"].values()
     ]
     assert urls, "registries should not be empty"
-    assert all("/SysBioChalmers/raven-data/releases/download/" in u for u in urls), urls
+    assert all("/CompMetEng/toolbox-assets/releases/download/" in u for u in urls), urls
 
 
 # --------------------------------------------------------------------------- #
diff --git a/tests/test_scripts_registry.py b/tests/test_scripts_registry.py
index 12130e10..c78c2b32 100644
--- a/tests/test_scripts_registry.py
+++ b/tests/test_scripts_registry.py
@@ -56,12 +56,12 @@ def test_release_base_url_builds_releases_download_prefix():
     # Default repo + an arbitrary tag → the canonical GitHub release-asset prefix.
     assert (
         mrs.release_base_url("v0.3.0")
-        == "https://github.com/SysBioChalmers/raven-toolbox/releases/download/v0.3.0"
+        == "https://github.com/CompMetEng/toolbox-assets/releases/download/v0.3.0"
     )
     # --repo override is honoured; the fixed "releases/download" path is always present.
     assert (
-        mrs.release_base_url("blast-2.16.0", repo="ORG/raven-data")
-        == "https://github.com/ORG/raven-data/releases/download/blast-2.16.0"
+        mrs.release_base_url("blast-2.16.0", repo="ORG/toolbox-assets")
+        == "https://github.com/ORG/toolbox-assets/releases/download/blast-2.16.0"
     )