Issues

• Possible error in dist_fit

  Bug

  MunchLab/ceREEBerus#132 · Filter by author ishikaghosh2201 opened on Oct 2, 2026

• Pulp new version 4.0.0 breaks the current ILP

  Task

  MunchLab/ceREEBerus#131 · Filter by author ishikaghosh2201 opened on Sep 28, 2026
  

• Truncated smoothing

  Feature

  MunchLab/ceREEBerus#130 · Filter by author lizliz opened on Sep 24, 2026

• Python versions

  enhancement
  MunchLab/ceREEBerus#121 · Filter by author lizliz opened on Sep 22, 2026

• Add stuff about smoothing to merge tree documentation

  documentation
  MunchLab/ceREEBerus#120 · Filter by author lizliz opened on Sep 22, 2026
  

• ReebGraph.relabel_nodes passes the multi-edge key where reset_pos is expected, silently disabling position recomputation

  Bug

  MunchLab/ceREEBerus#117 · Filter by author ishikaghosh2201 opened on Sep 21, 2026
  

• ReebGraph.slice() rebuilds its subgraph with the same O(n) reset_pos pattern already fixed elsewhere

  Bug

  MunchLab/ceREEBerus#115 · Filter by author ishikaghosh2201 opened on Sep 21, 2026
  

• : MapperGraph.add_edge triggers exponential redundant mapperify() rescans via recursive re-entry

  Bug

  MunchLab/ceREEBerus#113 · Filter by author ishikaghosh2201 opened on Sep 19, 2026
  

• computeReeb raises ValueError on near duplicate filtration values, even after the original tied-heights fix

  Bug

  MunchLab/ceREEBerus#111 · Filter by author ishikaghosh2201 opened on Sep 18, 2026
  

• get_levelset_components is O(n²) via pairwise is_face checks in computereeb

  Feature

  MunchLab/ceREEBerus#109 · Filter by author ishikaghosh2201 opened on Sep 17, 2026
  

• Merge tree/contour tree of image data

  enhancement
  MunchLab/ceREEBerus#104 · Filter by author lizliz opened on Jul 29, 2026

• Decorated merge trees

  enhancement
  MunchLab/ceREEBerus#103 · Filter by author lizliz opened on Jul 29, 2026

• Mapper delta usage

  enhancement
  MunchLab/ceREEBerus#101 · Filter by author lizliz opened on Jul 27, 2026

• Function for improving drawing

  enhancement
  MunchLab/ceREEBerus#99 · Filter by author lizliz opened on Jul 27, 2026

• Embedded graph construction for higher dimensions

  enhancement
  MunchLab/ceREEBerus#98 · Filter by author lizliz opened on Jul 27, 2026

• Embedded graph name

  documentation
  MunchLab/ceREEBerus#97 · Filter by author lizliz opened on Jul 27, 2026

• gif is not on continuous loop

  MunchLab/ceREEBerus#45 · Filter by author barnesd8 opened on Sep 19, 2023