Issues

• Intel-based apps will no longer be supported starting with macOS 28.

  1 Highbug
  aidenlab/Juicebox#1051 · Filter by author HypoxanthineX opened on Aug 26, 2026
  2

• Loading hiC map shows - error loading file

  aidenlab/Juicebox#1050 · Filter by author sajjadiqbal13 opened on May 27, 2026

• [BUG] Pre crashing due to ArrayIndexOutOfBoundsException at ComplexLineParser stage

  bug
  aidenlab/Juicebox#1049 · Filter by author callumjethomas opened on May 5, 2026
  1

• one chromosome divided into two

  aidenlab/Juicebox#1048 · Filter by author mehmetday opened on Mar 29, 2026

• What does this set of perpendicular lines mean? (not grid lines)

  aidenlab/Juicebox#1047 · Filter by author TeresaPegan opened on Feb 16, 2026
  2

• Normalization Vectors with AddNorm (-w and -r)

  aidenlab/Juicebox#1046 · Filter by author HengkuanLi opened on Dec 15, 2025
  1

• Error "java.lang.ArrayIndexOutOfBoundsException"

  aidenlab/Juicebox#1045 · Filter by author Ram-Nagar opened on Sep 30, 2025

• [BUG]

  bug
  aidenlab/Juicebox#1044 · Filter by author blakeskrable opened on Sep 9, 2025

• 求助

  aidenlab/Juicebox#1042 · Filter by author awen236 opened on Jun 23, 2025

• what is the base of log in log[observed/control] ？ 2 or 10 ？

  aidenlab/Juicebox#1041 · Filter by author WXsins opened on Jun 12, 2025

• Scaffold selection issue in Juicebox 2.16

  aidenlab/Juicebox#1040 · Filter by author VasiliyZubarev opened on Apr 12, 2025

• Matrix unavailable error

  aidenlab/Juicebox#1039 · Filter by author miajeffris opened on Apr 9, 2025

• Juicebox err

  aidenlab/Juicebox#1038 · Filter by author Xoey0314 opened on Mar 29, 2025

• bed file not displayed

  aidenlab/Juicebox#1037 · Filter by author AlcaArctica opened on Mar 25, 2025

• log4j has critical security vulnerabilities

  aidenlab/Juicebox#1036 · Filter by author adthrasher opened on Feb 7, 2025
  1

• no signal scaffold block

  aidenlab/Juicebox#1035 · Filter by author plant-assembler12 opened on Jan 13, 2025

• Juicebox .jar file not found. Exit

  aidenlab/Juicebox#1034 · Filter by author lifan2022 opened on Dec 27, 2024
  2

• PretextMap compatibility features

  aidenlab/Juicebox#1033 · Filter by author Overcraft90 opened on Jul 25, 2024

• No heatmap displayed in juicebox due to *.hic file, IDs are not matched between fai and merged_nodup.txt

  aidenlab/Juicebox#1032 · Filter by author wym0072003 opened on Jul 15, 2024

• How to create version 8 hic file?

  aidenlab/Juicebox#1030 · Filter by author DingWB opened on Mar 14, 2024

• [BUG]Unable to Open Folders Outside C:\Documents on Windows

  bug
  aidenlab/Juicebox#1029 · Filter by author thekingofall opened on Mar 2, 2024

• Confused about juicebox and juicertools jar releases

  aidenlab/Juicebox#1028 · Filter by author vidal-adrien opened on Feb 15, 2024
  2

• [BUG] import the review.assembly does not work

  bug
  aidenlab/Juicebox#1027 · Filter by author YaoZhou89 opened on Jan 16, 2024
  3

• where did the "remove chr boundaries" function go?

  aidenlab/Juicebox#1026 · Filter by author lorihandley opened on Jan 5, 2024

• chromosome contains which contigs.

  aidenlab/Juicebox#1025 · Filter by author sumoii opened on Dec 19, 2023