Issues

• Not an issue but a question

  splicebox/PsiCLASS#46 · Filter by author sanyalab opened on Mar 20, 2025
  1

• Combining IsoSeq long reads with stranded (rf) short reads.

  splicebox/PsiCLASS#44 · Filter by author JohnUrban opened on Jan 10, 2025
  7

• How does Psiclass generate the psiclass_vote.gtf file?

  splicebox/PsiCLASS#43 · Filter by author dgodin19 opened on Dec 29, 2024
  2

• Low complexity read filtering step in FindJunctions.cpp is broken for long reads

  splicebox/PsiCLASS#41 · Filter by author mbeavitt opened on Dec 10, 2024
  3

• Terminated

  splicebox/PsiCLASS#35 · Filter by author edugenetico opened on Apr 18, 2024

• Stuck in one region

  splicebox/PsiCLASS#33 · Filter by author s-kyungyong opened on Dec 11, 2023
  1

• your latest preprint...

  splicebox/PsiCLASS#32 · Filter by author lefterov opened on Sep 30, 2023
  3

• Experiencing very slow run-time

  splicebox/PsiCLASS#31 · Filter by author tcashby opened on Aug 11, 2023
  9

• Possible risks of including multiple datasets with different library features.

  splicebox/PsiCLASS#29 · Filter by author Pentayouth opened on Dec 23, 2022
  2

• Dockerfile

  splicebox/PsiCLASS#28 · Filter by author ens-ftricomi opened on May 24, 2022
  1

• Conda install does not work

  splicebox/PsiCLASS#27 · Filter by author Shellfishgene opened on May 9, 2022
  3

• Is XS tag indispensable for strand-specific RNA-seq library?

  splicebox/PsiCLASS#25 · Filter by author Pentayouth opened on May 2, 2022
  17

• Open: No such file or directory while running psiclass/classes

  splicebox/PsiCLASS#22 · Filter by author Atari61 opened on Nov 10, 2021
  9

• Strategy Question for genome annotation

  splicebox/PsiCLASS#20 · Filter by author sanyalab opened on Aug 9, 2021
  4

• Segmenation fault when using add-genename script

  splicebox/PsiCLASS#19 · Filter by author cc-prolix opened on Jul 14, 2021
  2

• Incorrect assemblies generated by PsiCLASS

  splicebox/PsiCLASS#17 · Filter by author sagnikbanerjee15 opened on Apr 13, 2021

• Read quality scores, indels and substitution

  splicebox/PsiCLASS#15 · Filter by author sagnikbanerjee15 opened on Jan 12, 2021
  6

• Running into segfault error 11

  splicebox/PsiCLASS#12 · Filter by author Akazhiel opened on Oct 9, 2020
  19

• Interrupted 3' gene end

  splicebox/PsiCLASS#11 · Filter by author splicebox opened on Aug 26, 2020
  2

• Issue with long introns

  splicebox/PsiCLASS#10 · Filter by author sagnikbanerjee15 opened on Jun 2, 2020
  8

• PsiCLASS running into an error

  splicebox/PsiCLASS#8 · Filter by author sagnikbanerjee15 opened on Mar 13, 2020
  10

• PsiCLASS cannot annotate micro-exons

  splicebox/PsiCLASS#6 · Filter by author sagnikbanerjee15 opened on Feb 7, 2020
  3

• Transcripts running in different directions having same gene name

  splicebox/PsiCLASS#4 · Filter by author sagnikbanerjee15 opened on Jan 15, 2020
  10

• Assembling samples from multiple conditions

  splicebox/PsiCLASS#3 · Filter by author sagnikbanerjee15 opened on Nov 7, 2019
  14

• Requesting help with some issues with PsiCLASS

  splicebox/PsiCLASS#1 · Filter by author sagnikbanerjee15 opened on Nov 5, 2019
  18