We decided to convert raw reads to relative reads for the fecal_data files because the fecal data we will be using as relative reads and converting them to relatives every time will become computationally expensive as the dataset grows. To be able to convert back to raw reads, we are adding total reads to the sample entries in fecal_sample_collection.
We decided to convert raw reads to relative reads for the fecal_data files because the fecal data we will be using as relative reads and converting them to relatives every time will become computationally expensive as the dataset grows. To be able to convert back to raw reads, we are adding total reads to the sample entries in fecal_sample_collection.
Add TrnL total reads to fecal_sample_collection
Add ITS total reads to fecal_sample_collection
Make sure data is in relative reads in trnL_fecal data
Make sure data is in relative reads in weetu_fecal_data
Make sure data is in relative reads in ITS_fecal_data
Write script to make this process simpler in the future