Search results

Error with runilastic plugin on CellProfiler

Status: Open.

#309 In CellProfiler/CellProfiler-plugins;

· DrAwesome32 opened on May 22, 2026

torch/cuda hard-coded bug in RunCellpose.py (running Cellpose 4 with Cellprofiler 4.2.8 on M1max)

Status: Open.

#300 In CellProfiler/CellProfiler-plugins;

· davewabbo opened on Mar 19, 2026

CellProfiler plugins (RunCellpose and Runilastik) working only in test mode and not in analysis mode using Docker Desktop in Windows computer

Status: Open.

#298 In CellProfiler/CellProfiler-plugins;

· ShataDg opened on Jan 15, 2026

RunCellpose crashes when 'show probability image' is on

Status: Open.

#295 In CellProfiler/CellProfiler-plugins;

· kate-bowers-broad opened on Oct 14, 2025

RunCellpose crashes when using Podman with GPU in Mac

Status: Open.

#293 In CellProfiler/CellProfiler-plugins;

· emiglietta opened on Sep 24, 2025

Add URL custom model download to RunCellpose

enhancement

Status: Open.

#280 In CellProfiler/CellProfiler-plugins;

· ErinWeisbart opened on Jul 31, 2025

CallBarcodes - add warning if Barcodes.csv is sparse matrix

enhancement

Status: Open.

#268 In CellProfiler/CellProfiler-plugins;

· ErinWeisbart opened on Jan 10, 2025

Runilastik doesn't work with multichannel input images

Status: Open.

#260 In CellProfiler/CellProfiler-plugins;

· bethac07 opened on Sep 10, 2024

Unit test failed

Status: Open.

#253 In CellProfiler/CellProfiler-plugins;

· binliunls opened on Aug 8, 2024

RunCellpose_Issues with GPU memory share setting

Status: Open.

#236 In CellProfiler/CellProfiler-plugins;

· sugan89 opened on Mar 1, 2024

RunCellpose error on Mac related to CUDA

Status: Open.

#233 In CellProfiler/CellProfiler-plugins;

· olasabet opened on Feb 14, 2024

RunCellpose and CUDA out of memory

Status: Open.

#230 In CellProfiler/CellProfiler-plugins;

· obruck opened on Jan 18, 2024