Issues

• Port metrics.R and reconcile assign_job_queue.R from molevol_scripts

  frontendhelp wanted
  Feature

  JRaviLab/MolEvolvR#144 · Filter by author jananiravi opened on Mar 25, 2026
  

• 🆕 [FEAT] Backend and processed data in duckdb, parquet formats

  enhancement
  Feature

  JRaviLab/MolEvolvR#133 · Filter by author jananiravi opened on Apr 7, 2025
  

• [FEAT] Search based on HMM profiles

  enhancement
  Feature

  JRaviLab/MolEvolvR#132 · Filter by author jananiravi opened on Mar 24, 2025 · v1 | package release
  1

  

• 🆕 [FEAT] Filter column toggles in tables per result availability

  bugenhancement
  Feature

  JRaviLab/MolEvolvR#131 · Filter by author epbrenner opened on Feb 25, 2025
  

• 🆕 [FEAT] Add multi-node run compatibility for R-package

  enhancement
  Feature

  JRaviLab/MolEvolvR#130 · Filter by author jananiravi opened on Feb 12, 2025
  

• 🆕 [FEAT] Add locus tags when available

  enhancement
  Feature

  JRaviLab/MolEvolvR#129 · Filter by author jananiravi opened on Feb 12, 2025
  

• 🆕 [FEAT] Custom BLAST searches

  enhancement
  Feature

  JRaviLab/MolEvolvR#128 · Filter by author jananiravi opened on Feb 12, 2025
  1

  

• 🆕 [FEAT] Structure-based MSA

  enhancement
  Feature

  JRaviLab/MolEvolvR#127 · Filter by author jananiravi opened on Feb 5, 2025
  

• 🆕 [FEAT] add parallelization options (even within R)

  enhancement
  Feature

  JRaviLab/MolEvolvR#126 · Filter by author jananiravi opened on Feb 5, 2025
  

• 🆕 [FEAT] add slurm/pbs integration

  enhancement
  Feature

  JRaviLab/MolEvolvR#125 · Filter by author jananiravi opened on Feb 5, 2025
  

• 🆕 [FEAT] Create custom bacterial DB

  enhancement
  Feature

  JRaviLab/MolEvolvR#124 · Filter by author jananiravi opened on Feb 5, 2025
  

• 🆕 [FEAT] Build custom viral DB

  enhancement
  Feature

  JRaviLab/MolEvolvR#123 · Filter by author jananiravi opened on Feb 5, 2025
  

• 🆕 [FEAT] Map protein names to UniProt/NCBI accession numbers

  enhancement
  Feature

  JRaviLab/MolEvolvR#122 · Filter by author jananiravi opened on Jan 12, 2025 · v1 | package release
  2

  

• 🆕 [FEAT] Map proteins to known pathogenesis DBs

  enhancement
  Feature

  JRaviLab/MolEvolvR#121 · Filter by author jananiravi opened on Dec 12, 2024
  

• removeTails: domains_keep undefined

  JRaviLab/MolEvolvR#119 · Filter by author the-mayer opened on Oct 30, 2024
  2

  

• Refactor Example Data: R-CMD check error

  bug
  Bug

  JRaviLab/MolEvolvR#118 · Filter by author the-mayer opened on Oct 29, 2024
  5

  

• Tree.R : R-CMD check

  JRaviLab/MolEvolvR#113 · Filter by author Klangina opened on Oct 28, 2024
  1

• [FEAT] Protein AccNum mapping

  bioinfoenhancementoutreachy
  Feature

  JRaviLab/MolEvolvR#109 · Filter by author Klangina opened on Oct 23, 2024 · v0 | short-term fixes
  6

  

• [FEAT] Generate case study report Rmd/Qmd

  documentationenhancementoutreachypackage
  Feature

  JRaviLab/MolEvolvR#102 · Filter by author jananiravi opened on Oct 16, 2024 · v1 | package release
  

• [DOC] convertFA2Tree

  cleanupdocumentationoutreachy
  JRaviLab/MolEvolvR#94 · Filter by author the-mayer opened on Oct 9, 2024 · v1 | package release
  2

  

• [FEAT] Fix, Implement DciA Figure

  codingdatavizenhancementoutreachypackage
  Feature

  JRaviLab/MolEvolvR#89 · Filter by author falquaddoomi opened on Oct 9, 2024 · v0 | short-term fixes
  3

  

• [FEAT] Fix, Implement InlP Figure

  codingdatavizenhancementoutreachypackage
  Feature

  JRaviLab/MolEvolvR#88 · Filter by author falquaddoomi opened on Oct 9, 2024 · v0 | short-term fixes
  14

  

• Tagging duplicate functions for later review.

  cleanupenhancement
  JRaviLab/MolEvolvR#78 · Filter by author the-mayer opened on Oct 8, 2024 · v1 | package release
  3

  

• 🐞[BUG] fix check bugs

  bug
  Bug

  JRaviLab/MolEvolvR#33 · Filter by author awasyn opened on Oct 4, 2024 · v0 | short-term fixes
  1

  

• [FEAT] Add GHA action to check package

  enhancement
  JRaviLab/MolEvolvR#32 · Filter by author awasyn opened on Oct 4, 2024 · v1 | package release
  2