Skip to content
Navigation Menu
Sign in
Products
Platform
GitHub
Repository hosting, code review, and collaboration
Copilot
AI coding agent for tasks, projects and automated work
Build & Ship
Actions
CI/CD and automation
Code Quality
Quality analysis, fixes, and enforcement
Codespaces
Cloud development environments
Secure
Code Security
Vulnerability detection and remediation
Secret Protection
Secret scanning and leak prevention
All Features
Developers
Learn
Documentation
Training
Certifications
Build
Build with Copilot
Customize Copilot
Integrations
Explore
Trending repos
GitHub Sponsors
Events
Changelog
Changelog
Your source for the latest features, improvements, and fixes across GitHub products, all in one place.
Businesses
By Stage
Enterprises
Team
Startups
Nonprofits
By Industry
Healthcare
Financial services
Manufacturing
Government
See all industries
Evaluate GitHub
Why GitHub
Customer Stories
Business insights
Trust Center
Add-ons
GitHub Advanced Security
Enterprise-grade code security
Copilot for business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Resources
Learn & Connect
Documentation
Resource center
Blog
Events & webinars
Community Forum
Customer Stories
Integrations
Support
Customer support
Training
GitHub Status
Company
About
Partners
Changelog
GitHub Universe
GitHub Universe
The event for developers, by developers — talks, workshops, and what’s next for GitHub.
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
JRaviLab
amRdata
Repository navigation
Code
Issues
13
(13)
Pull requests
5
(5)
Discussions
Actions
Projects
Security and quality
Insights
More
items
Genome metadata QC filtering
- #31
#31
Merged
epbrenner
merged 17 commits into
main
JRaviLab/amRdata:main
from
qc_filtering
JRaviLab/amRdata:qc_filtering
Copy head branch name to clipboard
Jul 29, 2026
Conversation
Commits
17
(17)
Checks
Files changed
Merged
Genome metadata QC filtering
#31
epbrenner
merged 17 commits into
main
JRaviLab/amRdata:main
from
qc_filtering
JRaviLab/amRdata:qc_filtering
Copy head branch name to clipboard
Commits
Commits on Jul 22, 2026
Add more genome quality filters to data_curation.R
Show description for ee9bfcb
epbrenner
committed
ee9bfcb
View commit details
Copy full SHA for ee9bfcb
Browse repository at this point
Style code (GHA)
epbrenner
committed
1c4e216
View commit details
Copy full SHA for 1c4e216
Browse repository at this point
Fixing helper function bug
Show description for 5761630
epbrenner
committed
5761630
View commit details
Copy full SHA for 5761630
Browse repository at this point
Style code (GHA)
epbrenner
committed
f00c12a
View commit details
Copy full SHA for f00c12a
Browse repository at this point
Swapping BiocParallel back to Future
Show description for b0de152
epbrenner
committed
b0de152
View commit details
Copy full SHA for b0de152
Browse repository at this point
Commits on Jul 23, 2026
Patching ref_file_path parameter check
Show description for eec360f
epbrenner
committed
eec360f
View commit details
Copy full SHA for eec360f
Browse repository at this point
Commits on Jul 24, 2026
Genome download updates in data_curation.R
Show description for ee3e0e4
epbrenner
committed
ee3e0e4
View commit details
Copy full SHA for ee3e0e4
Browse repository at this point
Style code (GHA)
epbrenner
committed
02d0c9c
View commit details
Copy full SHA for 02d0c9c
Browse repository at this point
Commits on Jul 27, 2026
rename functions
Show description for ec6209f
jananiravi
authored
ec6209f
View commit details
Copy full SHA for ec6209f
Browse repository at this point
Commits on Jul 28, 2026
Add future/furrr to DESCRIPTION; fix .with_future_plan() scoping bug; consolidate on furrr
eboyer221
committed
e2b88bd
View commit details
Copy full SHA for e2b88bd
Browse repository at this point
Applying fixes from code review
Show description for d658224
epbrenner
committed
d658224
View commit details
Copy full SHA for d658224
Browse repository at this point
Document future::multisession testing gotcha in README
eboyer221
committed
e9b1d39
View commit details
Copy full SHA for e9b1d39
Browse repository at this point
Merge branch 'qc_filtering' of https://github.com/JRaviLab/amRdata into qc_filtering
epbrenner
committed
fd7a9aa
View commit details
Copy full SHA for fd7a9aa
Browse repository at this point
Merge branch 'qc_filtering' of https://github.com/JRaviLab/amRdata into qc_filtering
epbrenner
committed
0d1b8f2
View commit details
Copy full SHA for 0d1b8f2
Browse repository at this point
Merge branch 'main' into qc_filtering
jananiravi
authored
b808115
View commit details
Copy full SHA for b808115
Browse repository at this point
Fixed reversions in data_curation.R
Show description for 2e6af65
epbrenner
and
jananiravi
committed
2e6af65
View commit details
Copy full SHA for 2e6af65
Browse repository at this point
Add test coverage for .apply_metadata_qc() and .parse_bvbrc_tsv()
eboyer221
committed
fe37c68
View commit details
Copy full SHA for fe37c68
Browse repository at this point
You can’t perform that action at this time.
