One or more parallel stages aborted. The following messages were reported:
--------------------------------- median_cov_region ( 11_L001 ) ----------------------------------
Command in stage median_cov_region failed with exit status = 2 :
set -o pipefail; /data/software_wdh/STRetch-master/tools/bin/goleft covmed 11_L001_R1.STRdecoy.bam SCA8_region.bed | cut -f 1 > 11_L001_R1.STRdecoy.median_cov
Use 'bpipe errors' to see output from failed commands.
One or more parallel stages aborted. The following messages were reported:
--------------------------------- median_cov_region ( 11_L001 ) ----------------------------------
Command in stage median_cov_region failed with exit status = 2 :
set -o pipefail; /data/software_wdh/STRetch-master/tools/bin/goleft covmed 11_L001_R1.STRdecoy.bam SCA8_region.bed | cut -f 1 > 11_L001_R1.STRdecoy.median_cov
Use 'bpipe errors' to see output from failed commands.