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@StanfordMIMI

Stanford MIMI Lab

Official GitHub repository for the Stanford Machine Intelligence in Medical Imaging Group, led by Dr. Akshay Chaudhari

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  1. skm-tea skm-tea Public

    Repository for the Stanford Knee MRI Multi-Task Evaluation (SKM-TEA) Dataset

    Python 104 19

  2. DDM2 DDM2 Public

    [ICLR2023] Official repository of DDM2: Self-Supervised Diffusion MRI Denoising with Generative Diffusion Models

    Python 192 25

  3. Comp2Comp Comp2Comp Public

    Computed tomography to body composition (Comp2Comp).

    Python 127 24

  4. MedVAE MedVAE Public

    [MIDL 2025] Efficient Automated Interpretation of Medical Images with Large-Scale Generalizable Autoencoders

    Python 197 21

  5. clin-summ clin-summ Public

    Clinical text summarization by adapting large language models

    Python 161 33

  6. Merlin Merlin Public

    [Nature 2026] Merlin is a 3D VLM for computed tomography that leverages both structured electronic health records (EHR) and unstructured radiology reports for pretraining.

    Python 487 61

Repositories

Showing 10 of 30 repositories
  • HeadEntropy Public

    [EMNLP, Findings 2026] We investigated if a method can estimate answer correctness with access only to the attention-based model, the prompt, and its answer.

    StanfordMIMI/HeadEntropy's past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Sep 25, 2026
  • Merlin Public

    [Nature 2026] Merlin is a 3D VLM for computed tomography that leverages both structured electronic health records (EHR) and unstructured radiology reports for pretraining.

    StanfordMIMI/Merlin's past year of commit activity
    Python 487 MIT 61 0 0 Updated Sep 24, 2026
  • llm-internet-browser-history-personalization Public
    StanfordMIMI/llm-internet-browser-history-personalization's past year of commit activity
    Python 0 0 0 0 Updated Aug 27, 2026
  • clinician-ai-collaboration Public
    StanfordMIMI/clinician-ai-collaboration's past year of commit activity
    Python 0 Apache-2.0 1 0 0 Updated Aug 6, 2026
  • MedVAE Public

    [MIDL 2025] Efficient Automated Interpretation of Medical Images with Large-Scale Generalizable Autoencoders

    StanfordMIMI/MedVAE's past year of commit activity
    Python 197 MIT 21 0 0 Updated Jul 10, 2026
  • CheXmix Public

    [CVPR 2026 Findings] CheXmix is a unified early-fusion generative model trained on a large corpus of chest X-rays paired with radiology reports.

    StanfordMIMI/CheXmix's past year of commit activity
    Python 8 2 0 0 Updated Jun 6, 2026
  • dspy-helm Public

    Structured Prompts Improve Evaluation of Language Models

    StanfordMIMI/dspy-helm's past year of commit activity
    Python 15 MIT 6 0 0 Updated Jun 5, 2026
  • SemanticBridge Public

    Self-Supervised Semantic Bridge for Unpaired Image-to-Image Translation

    StanfordMIMI/SemanticBridge's past year of commit activity
    24 0 1 0 Updated Feb 11, 2026
  • Comp2Comp Public

    Computed tomography to body composition (Comp2Comp).

    StanfordMIMI/Comp2Comp's past year of commit activity
    Python 127 Apache-2.0 24 30 2 Updated Jan 6, 2026
  • MedVAL Public

    Toward Expert-Level Medical Text Validation with Language Models

    StanfordMIMI/MedVAL's past year of commit activity
    Python 19 MIT 1 0 0 Updated Oct 23, 2025
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