Repository navigation

project_microtrawler

Public

About

project repo to reproduce microtrawler results

Custom properties

0 stars

2 watching

Report repository

Name		Name	Last commit message	Last commit date
post-analysis		post-analysis
.gitignore		.gitignore
0_dl-db		0_dl-db
1_dl-seqs		1_dl-seqs
2_analyze-seqs		2_analyze-seqs
3_analyze-crispr		3_analyze-crispr
3_analyze-integrons		3_analyze-integrons
3_analyze-plasmids		3_analyze-plasmids
3_analyze-prophages		3_analyze-prophages
3_analyze-resistance		3_analyze-resistance
4_straingenespecific		4_straingenespecific
5_amrfinderplus		5_amrfinderplus
README.md		README.md
RUN		RUN
all_rgiout_2022-09-16		all_rgiout_2022-09-16
analyze_rgi.ipynb		analyze_rgi.ipynb
funcs		funcs
nctc_accessions.tsv		nctc_accessions.tsv
paths		paths

Repository files navigation

Microtrawler Project

Repository to reproduce figures from the paper Genomic resistance in historical clinical isolates increased in frequency and mobility after the age of antibiotics

About

project repo to reproduce microtrawler results

Custom properties

0 stars

2 watching

Report repository

Releases

Packages

Contributors

Languages