Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
cassj
/
my_bioinfo_scripts
Public
Notifications
You must be signed in to change notification settings
Fork
2
Star
6
Code
Issues
0
Pull requests
0
Actions
Projects
Wiki
Security and quality
0
Insights
Additional navigation options
Code
Issues
Pull requests
Actions
Projects
Wiki
Security and quality
Insights
master
Branches
Tags
Go to file
Code
Open more actions menu
Latest commit
History
216 Commits
216 Commits
Folders and files
Name
Name
Last commit message
Last commit date
BioC/
liftover
BioC/
liftover
GenomeFeature
GenomeFeature
Manu_DNRest_Astro
Manu_DNRest_Astro
Mash1
Mash1
MattMGE
MattMGE
Mikkelsen07
Mikkelsen07
Published_Rest_Data
Published_Rest_Data
buckley_pipeline
buckley_pipeline
export2sorted
export2sorted
genomes
genomes
liftoveR
liftoveR
ngs
ngs
perlmods
perlmods
s3_tools
s3_tools
.RData
.RData
.Rhistory
.Rhistory
.gitignore
.gitignore
README
README
Rakefile.iop_connections
Rakefile.iop_connections
auto_genomic_primer.pl
auto_genomic_primer.pl
bash_intro.sh
bash_intro.sh
birthday.pl
birthday.pl
bwn_array_norm.rnw
bwn_array_norm.rnw
cdna_primer.pl
cdna_primer.pl
cdna_primer_report.txt
cdna_primer_report.txt
chipseq-analysis1.R
chipseq-analysis1.R
collaborations.xls
collaborations.xls
convert_excel.pl
convert_excel.pl
draw_iop_collaborations.R
draw_iop_collaborations.R
error.log
error.log
fetch_googledoc_as_excel.pl
fetch_googledoc_as_excel.pl
genomic_primer.pl
genomic_primer.pl
genomic_primer_by_pos.pl
genomic_primer_by_pos.pl
gtf2bed.pl
gtf2bed.pl
irc-bot.pl
irc-bot.pl
lab_meetings_to_google.pl
lab_meetings_to_google.pl
liftOver.R
liftOver.R
motif_tester.pl
motif_tester.pl
motifieR.R
motifieR.R
multi_genomic_primers.pl
multi_genomic_primers.pl
multi_genomic_primers.pl.diogo
multi_genomic_primers.pl.diogo
pdf_cat_manual.pl
pdf_cat_manual.pl
phylofoot.pl
phylofoot.pl
plot.density.R
plot.density.R
promoter_primers.pl
promoter_primers.pl
query_iranges_by_genename.R
query_iranges_by_genename.R
query_rangeddata_by_genename.R
query_rangeddata_by_genename.R
qw.R
qw.R
recursive_filename_change.pl
recursive_filename_change.pl
sample_reads.R
sample_reads.R
seq.fa
seq.fa
seq.fa2
seq.fa2
seq.gb
seq.gb
seq2fa.pl
seq2fa.pl
seq_primer.pl
seq_primer.pl
temp.out
temp.out
test.bed
test.bed
tiled_primers.pl
tiled_primers.pl
xmas_quiz.pl
xmas_quiz.pl
xpn_fc_comparison.R
xpn_fc_comparison.R
View all files
Repository files navigation
README
More
items
About
Just a dumping ground for an assortment of bioinformatics scripts in various states of disrepair.
Resources
Readme
Activity
Stars
6
stars
Watchers
1
watching
Forks
2
forks
Report repository
Releases
Packages
Used by
Contributors
Languages
You can’t perform that action at this time.