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CenGEN

The Complete Gene Expression Map of the C. elegans Nervous System

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  1. CengenApp CengenApp Public

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  2. Thresholding_sc Thresholding_sc Public

    Selecting a threshold for calling gene expression in single-cell data

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  3. CeNGEN_integrated_analysis_biorxiv_code CeNGEN_integrated_analysis_biorxiv_code Public

    code used analyzing data for the April 2022 CeNGEN biorxiv paper

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  4. novel_junctions novel_junctions Public

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  5. CeNGEN_integrated_analysis_2024 CeNGEN_integrated_analysis_2024 Public

    Github repo for the 2024 CeNGEN manuscript detailing our work analyzing gene expression data from FACS sorted C. elegans neurons, integrating data from both bulk and single cell RNA-seq methods

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  6. connectivity_analysis connectivity_analysis Public

    Hypothesis testing the genetic basis of the connectome

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