Skip to content

Release notes

Jump to bottom
Sergey Aganezov jr edited this page Oct 30, 2016 · 4 revisions

Here is the list of notes and the overview of changes, that happen to CAMSA. The full list of releases with relative links to the corresponding sections.

1.0.0

1.0.0b1

Initial CAMSA release

Core

  • added support for multiple scaffold assemblies comparative analysis w.r.t identifying in / out - (semi) - conflicts of individual assembly points
  • added support for merging of multiple scaffold assemblies in a single one, implementing two heuristic strategies maximal-matching and progressive merging
  • added a comprehensive interactive report generation

Utils

  • added fasta2camsa_points.py utility script, which allows for translation of FASTA formatted scaffolding results (with the use of NUCmer) into CAMSA supported input

Other

  • added PyPI disctribution

Sergey Aganezov & Max A. Alkseyev, Computational Biology Institute, The George Washington University

Home

Installation

Input

Usage

Output

Utils

Troubleshooting

Release notes

Feedback

Clone this wiki locally