SOF-8032: stop sending raw query/projection blobs to migrated li…

config.yml

@@ -51,6 +51,7 @@ notebooks:
       - emfs:/drive/packages/watchdog-2.3.1-py3-none-any.whl
   - name: specific_examples
     packages_pyodide:
+      - pandas
       - mat3ra-standata
 #      - mat3ra-notebooks-utils[utils_standata]
   - name: analyze_convex_hull
@@ -75,6 +76,7 @@ notebooks:
     packages_pyodide:
       - annotated_types>=0.6.0
       - jinja2
+      - pandas
       - emfs:/drive/packages/pydantic_core-2.18.2-py3-none-any.whl
       - emfs:/drive/packages/pydantic-2.7.1-py3-none-any.whl
       - mat3ra-standata

examples/job/create_and_submit_job.ipynb

@@ -120,10 +120,11 @@
    },
    "outputs": [],
    "source": [
+    "workflow = client.workflows.get(workflow_id)\n",
     "config = {\n",
     "    \"owner\": {\"_id\": OWNER_ID},\n",
     "    \"_material\": {\"_id\": material_id},\n",
-    "    \"workflow\": {\"_id\": workflow_id},\n",
+    "    \"workflow\": workflow,\n",
     "    \"name\": JOB_NAME,\n",
     "}"
    ]

examples/job/get-file-from-job.ipynb

@@ -111,10 +111,21 @@
     "material_id = client.bank_materials.copy(bank_material_id, owner_id)[\"_id\"]\n",
     "materials = client.materials.list({\"owner._id\": owner_id})\n",
     "\n",
-    "# Create the job\n",
-    "job = client.jobs.create_by_ids(\n",
-    "    materials=materials, workflow_id=workflow_id, project_id=project_id, owner_id=owner_id, prefix=\"Test_Job_Output\"\n",
-    ")[0]\n",
+    "# Create the job - JobsCreate's schema requires the full workflow document embedded (a job keeps\n",
+    "# an immutable snapshot of what it actually ran), not just a {\"_id\": ...} reference, so fetch it\n",
+    "# in full before building the job config (project/material references stay {\"_id\": ...}, which the\n",
+    "# schema does accept for those fields).\n",
+    "workflow = client.workflows.get(workflow_id)\n",
+    "material = materials[0]\n",
+    "job_config = client.jobs.build_config(\n",
+    "    material_ids=[material[\"_id\"]],\n",
+    "    workflow_id=workflow_id,\n",
+    "    project_id=project_id,\n",
+    "    owner_id=owner_id,\n",
+    "    name=\" \".join((\"Test_Job_Output\", material[\"formula\"])),\n",
+    ")\n",
+    "job_config[\"workflow\"] = workflow\n",
+    "job = client.jobs.create(job_config)\n",
     "\n",
     "# Submit the job\n",
     "client.jobs.submit(job[\"_id\"])\n",

other/materials_designer/workflows/equation_of_state.ipynb

@@ -529,7 +529,7 @@
    "outputs": [],
    "source": [
     "jobs_set_name = f\"{JOBS_SET_PREFIX} {base_label} {timestamp}\"\n",
-    "jobs_set = client.jobs.create_set({\"name\": jobs_set_name, \"owner\": {\"_id\": ACCOUNT_ID}})\n",
+    "jobs_set = client.jobs.create_set({\"name\": jobs_set_name, \"projectId\": project_id})\n",
     "print(f\"Created jobs set: {jobs_set['name']} ({jobs_set['_id']})\")"
    ]
   },

src/py/mat3ra/notebooks_utils/ipython/entity/property/plot.py

@@ -23,7 +23,6 @@
 FONT_SIZE_LABEL_STABLE = 16
 FONT_SIZE_LABEL_UNSTABLE = 14
 FONT_SIZE_LEGEND = 14
-TEXT_SHADOW = "2px 2px 4px rgba(0,0,0,0.8), " "-2px -2px 4px rgba(0,0,0,0.8), " "0px 0px 8px rgba(0,0,0,0.9)"
 
 # Markers
 MARKER_SIZE = 20
@@ -60,14 +59,10 @@ def plot_convex_hull(phase_diagram: PhaseDiagram, show_unstable: float = 0.2) ->
         trace.marker.size = MARKER_SIZE
         if trace.name == "Stable":
             trace.textposition = "top center"
-            trace.textfont = dict(
-                size=FONT_SIZE_LABEL_STABLE, color=TEXT_COLOR_PRIMARY, family=FONT_FAMILY, shadow=TEXT_SHADOW
-            )
+            trace.textfont = dict(size=FONT_SIZE_LABEL_STABLE, color=TEXT_COLOR_PRIMARY, family=FONT_FAMILY)
         else:
             trace.textposition = "bottom center"
-            trace.textfont = dict(
-                size=FONT_SIZE_LABEL_UNSTABLE, color=TEXT_COLOR_UNSTABLE, family=FONT_FAMILY, shadow=TEXT_SHADOW
-            )
+            trace.textfont = dict(size=FONT_SIZE_LABEL_UNSTABLE, color=TEXT_COLOR_UNSTABLE, family=FONT_FAMILY)
 
     axis_style = dict(
         title=dict(font=dict(size=FONT_SIZE_TITLE, color=TEXT_COLOR_PRIMARY)),