Repository navigation

Python interface for 3PCF - #16

Open

misharash wants to merge 148 commits into

oliverphilcox:masterfrom

misharash:interface_3pcf

Open

Python interface for 3PCF#16
misharash wants to merge 148 commits into
oliverphilcox:masterfrom
misharash:interface_3pcf

Commits on Nov 13, 2025
- Switched the scripts to argparse
  misharash
  committed
  84b5893
- Merge branch 'fix_power' into fix_3pcf
  misharash
  committed
  ff9c0fb
- Reverted to 3PCF mode compilation
  misharash
  committed
  60d291c
Commits on Dec 7, 2025
- Merge branch 'quickfix' into fix_3pcf
  misharash
  committed
  fec9508
Commits on Dec 17, 2025
- Started the 3PCF interface
  misharash
  committed
  082db82
- 3PCF interface work in progress
  misharash
  committed
  4b170cd
- Merge branch 'quickfix' into fix_3pcf
  misharash
  committed
  c65bdef
- Merge branch 'fix_3pcf' into interface_3pcf
  misharash
  committed
  0713372
Commits on Dec 18, 2025
- Added the 3PCF binary to library build
  misharash
  committed
  c058084
- Added triple_counts binary to library build
  misharash
  committed
  3bc30e5
- Integral loop timing for 3PCF
  misharash
  committed
  f7be42e
- Copied random seed logic for 3PCF
  misharash
  committed
  f82b92b
- Copied integral output logic for 3PCF
  misharash
  committed
  09d245a
- Copied verbose logic for 3PCF
  misharash
  committed
  2b47f44
- Added RRR counts computation via triple_counts
  misharash
  committed
  0b42c7a
- Copied random seed logic for triple_counts
  misharash
  committed
  bdd3e16
- Copied verbose logic for triple_counts
  misharash
  committed
  bf52b7e
- triple_counts Makefile cleanup
  misharash
  committed
  371c09c
- Fix for the periodic case
  misharash
  committed
  7cc99c3
Commits on Dec 19, 2025
- Rearrangements in 3PCF survey correction function
  misharash
  committed
  44387f8
- Vectorized the 3PCF correction function computation
  misharash
  committed
  d57b09b
- 3PCF correction function conversion from ENCORE
  misharash
  committed
  2020d5b
- Remove normalize_wcounts logic for 3PCF
  misharash
  committed
  a447424
- Fixes for 3PCF correction function from ENCORE
  misharash
  committed
  b31b771
- Merge branch 'master' into fix_3pcf
  misharash
  committed
  e21d159
- Merge branch 'fix_3pcf' into interface_3pcf
  misharash
  committed
  68859b2
- Fixed misprint in the ENCORE multipole conversion factor
  misharash
  committed
  910471d
- More hints about ENCORE RRR counts
  misharash
  committed
  5321201
- Changed the 3PCF wrapper name and description
  misharash
  committed
  4caf63f
- Note about ENCORE vs triple_counts
  misharash
  committed
  b33de4c
- Correction on above/below the diagonal
  misharash
  committed
  5beae0d
- More fixes and explanations
  misharash
  committed
  558be43
Commits on Dec 20, 2025
- Added checks for negative RRR counts
  misharash
  committed
  98aa11f
- Separated RRR counts positivity check as function
  misharash
  committed
  c0f6ca6
- Docstring correction
  misharash
  committed
  42a4d74
- Separated the 3PCF survey correction value check
  misharash
  committed
  bacd8d0
- Improved the inter/extrapolation robustness
  misharash
  committed
  63dd453
- Updated usage notes for 3PCF wrapper
  misharash
  committed
  c8aa8ec
Commits on Jan 20, 2026
- Import fix
  
  karimpsi22
  authored and
  misharash
  committed
  fabfbd9
- Iteration numbers fix for 3PCF
  misharash
  committed
  f3b4bab
- Decorations/explanations for 2PCF iteration numbers
  misharash
  committed
  11e48d8
Commits on Jan 22, 2026
- Cosmetic fixes about iteration numer
  misharash
  committed
  31dcd67
- Options to skip some of the 2 3PCF integrals
  misharash
  committed
  3166bcd
- Adapted extra convergence check to 3PCF
  misharash
  committed
  fd8aab2
- 3PCF post-processing fixes
  misharash
  committed
  8147096
Commits on Jan 27, 2026
- 3PCF cov conversion/loading/export
  misharash
  committed
  e8b2aa5
Commits on Jan 28, 2026
- Raw 3PCF cov collection/loading/catenation
  misharash
  committed
  44fc9e1
Commits on Jan 29, 2026
- Small fixes for raw 3PCF cov utils
  misharash
  committed
  41f48c3
- Improved some NumPy type annotations
  misharash
  committed
  62c3182
- Rewritten 3PCF post-processing
  misharash
  committed
  8e7126e
Commits on Feb 2, 2026
- 3PCF post-processing fixes
  misharash
  committed
  2091fdb
- Rewritten cov filter application
  misharash
  committed
  23f81e5
- Simple convergence diagnostic for 3PCF cov
  misharash
  committed
  2367ace
- Comment corrections
  misharash
  committed
  3651f63
Commits on Feb 9, 2026
- Fixed top docstring for 3PCF cov utils
  misharash
  committed
  00cedaa
- 3PCF library docs outline
  misharash
  committed
  ca60753
- Docstring and slight change for 3PCF post-processing
  misharash
  committed
  3a71110
- Option to exclude odd ell for 3PCF
  misharash
  committed
  96e01d2
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  9877308
- Version bump
  misharash
  committed
  bf87c73
Commits on Feb 20, 2026
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  39cac65
Commits on Mar 11, 2026
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  e60ed2b
- Enhanced finished run check for 3PCF
  misharash
  committed
  9cf61b0
- Comment fixes
  misharash
  committed
  a4e45f9
Commits on Mar 26, 2026
- Fix 3PCF cov load/export/conversion
  misharash
  committed
  017b101
Commits on Apr 1, 2026
- Option to enable c6_0 term
  misharash
  committed
  de11a7a
Commits on Apr 17, 2026
- Merge branch 'lsstypes' into interface_3pcf
  misharash
  committed
  b1391c8
- lsstypes support for the 3PCF interface
  misharash
  committed
  995e201
- Merge branch 'lsstypes' into interface_3pcf
  misharash
  committed
  7ba7205
Commits on Apr 20, 2026
- Merge branch 'lsstypes' into interface_3pcf
  misharash
  committed
  46d76d7
- Note on structure of raw cov matrices collection
  misharash
  committed
  0b4b7a1
- Little clarifications in the C++ code
  misharash
  committed
  6a7044e
Commits on Apr 21, 2026
- Revert "Option to enable c6_0 term"
  misharash
  committed
  6035170
- Excluded c6_0 term and explained why
  misharash
  committed
  991b69c
- Skip c6_0 term computation
  misharash
  committed
  9e58a36
- Small corrections in comments
  misharash
  committed
  ef8e8c9
Commits on Apr 26, 2026
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  4a696b6
- Version bump
  misharash
  committed
  6741119
Commits on Apr 27, 2026
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  0fd031c
Commits on May 22, 2026
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  838c349
- Earlier tmp files cleanup (3PCF interface)
  misharash
  committed
  df817e4
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  c445692
Commits on May 26, 2026
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  1c2c357
- Added effective number option in the 3PCF interface
  misharash
  committed
  1b2d8e1
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  518c60b
- Type hints for start/last_integral_index (3PCF)
  misharash
  committed
  d8271c8
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  e69cdf7
Commits on Jun 5, 2026
- Propagated check_finished logic to 3PCF post-processing
  misharash
  committed
  fc0dd27
- Separated 3PCF post utility function
  misharash
  committed
  7b4c922
- Near-final draft of 3PCF mock post-processing
  misharash
  committed
  1041af4
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  ab4cd86
- Implemented conversion of the 3PCF mock cov
  misharash
  committed
  316e95a
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  4f905e2
- Small edits in comments
  misharash
  committed
  56a5de4
Commits on Jun 8, 2026
- Fixed the name for the new function
  misharash
  committed
  6f83e7e
- Option for different max_l in the mock cov
  misharash
  committed
  32544d1
- Corrected explanation on mock_cov_file
  misharash
  committed
  b422ed5
Commits on Jun 12, 2026
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  73839db
Commits on Jun 25, 2026
- Fixed mu_min issue for triple_counts
  misharash
  committed
  173a5bb
- Fixed triple mbin with a new define flag
  misharash
  committed
  314ed0a
- Cleanup/fixes in parameters and usage
  misharash
  committed
  f6f8fe5
- Comments on the 3PCF survey correction
  misharash
  committed
  f6b4e7b
Commits on Jul 1, 2026
- Disabled more irrelevant chunks for triple_counts
  misharash
  committed
  13259c8
- Disabled early integration stop for predictability (3PCF)
  misharash
  committed
  23bc58d
- Frobenius reporting format consistent with 2PCF
  misharash
  committed
  aeede82
- More consistent progress reporting (3PCF)
  misharash
  committed
  d746077
- Eliminated another irrelevant parameter for triple_counts
  misharash
  committed
  211a507
- Removed loops_per_sample from triple_counts call
  misharash
  committed
  471c8fd
- Fix: elimination of early stop variables
  misharash
  committed
  5403a57
- Small fixes to free memory
  misharash
  committed
  b1355fa
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  bb1d81b
- Numpy array typing fixes for 3PCF
  misharash
  committed
  1ec533a
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  a68bd80
- Avoid changing the tripe_counts array outside the function
  misharash
  committed
  1b4769c
- Brief and consistent diagnostic of the 3PCF survey correction function
  misharash
  committed
  a455cd8
- Added option for normalized RRR counts
  misharash
  committed
  c16f371
Commits on Jul 2, 2026
- Renamed the inv sqrt matrix
  misharash
  committed
  e383c26
Commits on Jul 3, 2026
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  6c71739
Commits on Jul 9, 2026
- Tiny correction for 3PCF integral number
  misharash
  committed
  198b38e
- Disabled directory creation for triple_counts
  misharash
  committed
  b6bef83
Commits on Aug 24, 2026
- Corrected equation reference
  misharash
  committed
  408473e
- Reference for RascalC Legendre basis
  misharash
  committed
  e9ce24e
- Inserted factor of 6 found by Karim with LLM assistance
  misharash
  committed
  b36cd06
Commits on Aug 26, 2026
- Open questions/remarks on 3PCF correction function
  misharash
  committed
  701372b
- Note on the volume estimate accuracy
  misharash
  committed
  dd750db
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  2bc2437
- Clarifications on the 3PCF correction function
  misharash
  committed
  35f8775
- Further observations on correction factors
  misharash
  committed
  386e11c
Commits on Aug 27, 2026
- Remark on triple_counts symmetry
  misharash
  committed
  8333f1d
- Remark on the bin volume factors
  misharash
  committed
  c493d3b
- Implemented fix for the ENCORE correction factor
  misharash
  committed
  778fa47
- Remark on (2*p+1) factors for posterity
  misharash
  committed
  8299911
- Remark on 3PCF conversion vs RRR
  misharash
  committed
  3cdf5b8
Commits on Sep 1, 2026
- Slightly expanded remark
  misharash
  committed
  48e61ab
Commits on Sep 3, 2026
- Further explanations for the 3PCF correction function
  misharash
  committed
  36e2a01
- Fix for xi_s_edges filler (3PCF)
  misharash
  committed
  1e6c893
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  854065b
Commits on Sep 10, 2026
- Simplified 3PCF symmetrization
  misharash
  committed
  989f174
- Added factor to scale 3PCF covs (temporarily?)
  misharash
  committed
  d6929df
- Small fix in a C++ comment
  misharash
  committed
  a5f6fcb
- Refactored hard-coded line size
  misharash
  committed
  0935370
Commits on Sep 21, 2026
- Function to fit best overall scaling for 3PCF cov
  misharash
  committed
  5b9c0a4
- Revert "Added factor to scale 3PCF covs (temporarily?)"
  misharash
  committed
  edd5d27
- Reimplemented the overall scaling of the 3PCF covs
  misharash
  committed
  808f5fe
- Small fix/clarification on best overall 3PCF scaling
  misharash
  committed
  be15fdd
Commits on Sep 22, 2026
- Fixed the overall scaling fit function
  misharash
  committed
  c350039
- Avoid extra Legendre polynomial sometimes
  misharash
  committed
  3700273
Commits on Sep 23, 2026
- Merge branch 'master' into interface_3pcf
  misharash
  committed
  6f51d32

Commits

Commits on Nov 13, 2025

Commits on Dec 7, 2025

Commits on Dec 17, 2025

Commits on Dec 18, 2025

Commits on Dec 19, 2025

Commits on Dec 20, 2025

Commits on Jan 20, 2026

Commits on Jan 22, 2026

Commits on Jan 27, 2026

Commits on Jan 28, 2026

Commits on Jan 29, 2026

Commits on Feb 2, 2026

Commits on Feb 9, 2026

Commits on Feb 20, 2026

Commits on Mar 11, 2026

Commits on Mar 26, 2026

Commits on Apr 1, 2026

Commits on Apr 17, 2026

Commits on Apr 20, 2026

Commits on Apr 21, 2026

Commits on Apr 26, 2026

Commits on Apr 27, 2026

Commits on May 22, 2026

Commits on May 26, 2026

Commits on Jun 5, 2026

Commits on Jun 8, 2026

Commits on Jun 12, 2026

Commits on Jun 25, 2026

Commits on Jul 1, 2026