[karolamik13]

PyMol visualization was already done by Jan from the calcChannels() level (PR2278), but since I created writeVmdCaviTracerScript() in PR2279 to provide a TCL script with automatic visualization of the CaviTracer results, I decided to create analogous functions for both PyMol (using functions created by Jan) and Chimera.

In this pull request, we have two functions:

• writePyMolCaviTracerScript - generate pdb, cif, and PY file to open CaviTracer objects (channels, pores, etc.) in PyMol
• writeChimeraXCaviTracerScript - generate pdb, pqr, and cxc files to visualize CaviTracer objects in ChimeraX

[jamesmkrieger]

I haven't managed to have a proper look through it but I trust it's ok

[karolamik13]

I haven't managed to have a proper look through it but I trust it's ok

Thank you, James.