bigsdb

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TinusTK / corynebacterium-diphtheriae-typing

Tool for Corynebacterium diphtheriae assemblies: tox gene detection, tox allele assignment and 7-gene MLST typing against the BIGSdb-Pasteur database. Runs in Galaxy or on the command line.

bioinformatics genomics public-health mlst galaxy bigsdb diphtheria galaxy-tools corynebacterium-diphtheriae

Updated Oct 24, 2026
Python

BU-ISCIII / download_bigsdb_api

Star

Script for interactive download schemas and definitions for any bigsdb installation using its api. Useful for downloading wg/cgMLST genes and alleles.

rest-api python3 alleles cgmlst-genes bigsdb-installation bigsdb

Updated Dec 21, 2021
Python

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