ImageJ macros and scripts written at the imaging facility MRI
quantixed FIJI update site
A repository for some tools providing features that are external to Aivia, such as: complex image montage, LUT color mapping creation, etc.
ImageJ / FIJI script to analyse picrosirius red stained sections imaged under polarising light
Custom software written for analysis of spatial proteomics data from fetal lung acquired in the HDCA project.
(CS F266) An ImageJ macro for Quantitative Analysis of OCTA images.
Helper scripts and macros using BoneJ
Fiji/ImageJ plugin with a Jython GUI for four-channel microscopy preprocessing, channel-3 segmentation, ROI-guided cell detection, and per-cell multichannel quantification.
Compilation of ImageJ macros to do a wide variety of functions.
Repository of imageJ macros I have developed.
A series of ImageJ plugins to run z stack imaging analysis faster
ImageJ / FIJI script to analyse picrosirius red stained sections imaged under transmitted light
This plugins automates the image processing necessary to segment and count nuceli from presumably alive cells in a DAPI staining confocal z-stack projection
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