isoseq

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Genome annotation with PacBio Iso-Seq. Takes raw subreads as input, generate Full Length Non Chemiric (FLNC) sequences and produce a bed annotation.

workflow pipeline nextflow rna ultra nf-core tama isoseq-3 isoseq

IsoTools is a python module for Long Read Transcriptome Sequencing (LRTS) analysis.

bioinformatics python3 pacbio transcriptomics splicing-analyses lrts isoseq

iFLAS: integrated Full-Length Alternative Splicing analysis for plant transcriptomes (PacBio, Nanopore and Illumina reads)

Genome annotation with PacBio Iso-Seq. Takes raw subreads as input, generate Full Length Non Chemiric (FLNC) sequences and produce a bed annotation.

workflow work rna ultra nf-core tama isoseq-3 isoseq

WDL workflow for PacBio Kinnex Iso-Seq bulk RNA analysis

pacbio wdl rna-sequencing transcriptomics long-read-sequencing isoseq kinnex

A snakemake workflow to automate the IsoSeq3 pipeline from Pacific Biosciences

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