SequenceAlignment

Overview

Create a library of sequence alignment tools from scratch including the following algorithms:

• Smith-Waterman:
  

• Needleman-Wunsch:
  

• Multiple Alignment:
  

Requirement packages:

No specific package required

Installation

import the module directly from the module in src directory.

Test:

Some test functions are provided in the test.py under the foulder of .test using pytest framework.

pytest test/test_<name-of-algorithm-you-want-to-test>.py