NingLab

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1. MGM MGM Public

   MGM (Microbial General Model) as a large-scaled pretrained language model for interpretable microbiome data analysis.

   Jupyter Notebook 62 12

2. BGC-Prophet BGC-Prophet Public

   A deep learning approach that leverages language processing neural network model to accurately identify known BGCs and extrapolate novel ones.

   Python 32 2

3. EXPERT EXPERT Public

   Transfer Learning-enabled context-aware microbial source tracking

   Python 16 4

4. ONN4MST ONN4MST Public

   Ontology-aware neural network (ONN) for microbial community sample source tracking!

   Python 10 1

5. EXPERT-Disease-GGMP EXPERT-Disease-GGMP Public

   Overcoming regional limitations: Transfer learning for cross-regional microbial-based diagnosis of diseases

   R 8 1

6. BGC-Finder BGC-Finder Public

   Jupyter Notebook 7 2